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Table 1 Data-driven precision diagnosis in digestive diseases based on radiomics

From: Data-driven decision-making for precision diagnosis of digestive diseases

First author, year

Disease

n

Data source and specific task

ML method

Diagnostic performance

Refs.

Liu, 2022

GIST

106

Abdominal CT image; VOI segmentation, image normalization and feature extraction

GLM/LASSO

Accuracy: 80.8%

[47]

Kim, 2021

CRC

502

Abdominal CT image; ROI segmentation, feature extraction

CNN/Transfer Learning

Sensitivity: 81.82%

[48]

Ma, 2017

GC

40

Abdominal CT image; VOI segmentation, feature extraction

LASSO

Accuracy: 81.43%

[49]

Yasar, 2019

GC

10

Endoscopic image; image-based segmentation

Clustering

Accuracy: 96.33%

[51]

Li, 2021

Crohn disease

167

Abdominal CT enterography; VOI segmentation, feature extraction and selection

LASSO

AUC: 0.816 (95%CI, 0.706–0.926)

[52]

Yuan, 2022

CRC

140

Abdominal CT image; manual contouring, image-based ResNet-3D base neuron

ResNet3D/SVM

AUC: 0.922 (95%CI, 0.912–0.944)

[53]

Wu, 2022

Hepatic cystic echinococcosis

967

Abdominal ultrasound image; artificial marker repair and ROI extraction, image-based classification

DCNN

Accuracy: 90.6%

[54]

Kundu, 2020

Multi-disease detection

50

WCE image; image ROI separation, probability density function

LDA/Hierarchical SVM

Accuracy: 97.39%

[55]

Klang, 2020

Crohn disease

49

WCE image; image-based classification

CNN

Accuracy: 95.4–96.7%

[56]

Dmitriev, 2020

Pancreatic cystic lesions

134

Abdominal CT image; graph-based segmentation

RF/CNN

Accuracy: 91.7%

[57]

Meng, 2022

Crohn disease

235

Abdominal CT enterography; image ROI separation, patch-based classification

3D DCNN

AUC: 0.808–0.839

[58]

Wang, 2023

GHAC

216

Abdominal CT image; image ROI segmentation and radiomics feature extraction

LASSO

AUC: 0.731–0.942

[59]

Shi, 2023

PMME

122

Chest CT image; image resampling, tumor segmentation and feature extraction

LASSO

AUC: 0.906–0.975

[60]

Zhou, 2023

Crohn disease

316

CT enterography; VAT features extraction

PCA/LASSO/3D-CNN

AUC: 0.775 (95%CI, 0.683–0.868)

[61]

Sun, 2019

GC

100

Abdominal CT image; ROI segmentation and radiomics feature extraction

LASSO

AUC: 0.903

[62]

Lonseko, 2023

GI lesion

4880

GI endoscopic image; gastrointestinal lesion segmentation

GANs/CNN

Precision: 91.72% ± 4.05%

[63]

Jia, 2023

GIST

151

Abdominal CT image/EUS image; image segmentation, image normalization, and feature

extraction

LASSO

AUC: 0.766–0.866

[64]

Guo, 2022

CRC

360

Abdominal imaging examination data; ROI segmentation and feature extraction

CNN/K-means clustering

AUC: 0.950

[65]

Du, 2023

gastric neoplasms

3449

WL and WM endoscopy image and video; ROI segmentation and feature extraction

CNN

Accuracy: 90.0%

[66]

Tang, 2023

GI tract diseases

1645

GI endoscopic image; classification and segmentation

TransMT-Net

Accuracy: 96.9%

[67]

Gong, 2023

gastric neoplasms

8993

GI endoscopic image; semantic segmentation

U-Net +  + /CNN

Accuracy: 95.6%

[68]

Yang, 2023

Intestinal Metaplasia Gastritis Atrophy

21,420

Gastric endoscopic image; localization, patch-based classification

LAG/DTL

Accuracy: 97.1–99.2%

[69]

Ding, 2023

GI lesion

2565

Capsule endoscopy image and video; image-based classification

CNN/CRNN

Accuracy: 79.2–97.5%

[70]

Muniz, 2023

CRC

71

Micro-FTIR absorbance HSI from biopsy tissue; localization, voxel-based classification

FCNN/linear SVM

Accuracy: 96–99%

[71]

Du, 2023

GC

1273

Gastroscopic image; segmentation, co-spatial attention and channel attention

CSA–CA–TB–ResUnet

Accuracy: 91.2%

[72]

Yuan, 2023

GC

4315

Tongue image; patch-based classification

KNN/SVM/DT/APINet/TransFG/DeepLabV3 + 

AUC: 0.830–0.920

[73]

Faust, 2023

Celiac Disease

96

Duodenitis biopsy image; CLAHE, feature extraction

SVM/KNN/DT

Accuracy: 98.5–98.6%

[74]

Kim, 2023

CRC

889

CRC histopathologic slide; patch extraction and normalization, patch-based classification

CNN

Accuracy: 95.5%

[75]

Abdelrahim, 2023

Barrett's neoplasia

270

Gastroscopy image and video; image-based classification

CNN

Accuracy: 92.0–94.7%

[76]

Fockens, 2023

Barrett's neoplasia

4920

WL endoscopy image; segmentation, image-based classification

EfficientNet‐Lite1/MobileNetV2 DeepLabV3 + 

Sensitivity: 84–100%

[77]

Zhang, 2023

gastrointestinal disorders

315,767

Gastroscopy image and video; localization, video-based classification

DCNN

Accuracy: 73.1–85.2%

[78]

Zhou, 2023

gastric polyps/gastric ulcers/gastric erosions

227

Gastroscopic image; feature extraction, feature fusion, image-based classification

GoogLeNet/ResNet/ResNeXt/SVM/RF

Accuracy: 81.7–82.5%

[79]

Fan, 2023

UC

332

Endoscopic image and video; feature extraction, image-based classification

CNN

Accuracy: 86.54%

[80]

Faghani, 2022

Barrett's esophagus

542

Esophagus histology slide; image-based classification

CNN

Sensitivity: 90–100%

[81]

Yang, 2022

upper GI diseases

9403

GI endoscopic image; image-based classification

VGG-11/ResNet50/DenseNet121

Accuracy: 91.8%

[82]

Yuan, 2022

ESCC

685

GI endoscopic image; feature extraction, patch-based classification

DCNN

Accuracy: 89.8–91.3%

[83]

Luo, 2022

CAG

4005

GI WL image; image-based classification

CNN

Accuracy: 85.4–91.6%

[84]

  1. Full names of abbreviations are given in the Abbreviations section of the manuscript