A protocol for CABS-dock protein–peptide docking driven by side-chain contact information

Table 2 Input data for CABS-dock protein–peptide docking using information about side-chain contacts

PDB	Receptor chain	Peptide sequence	ID of contact residues
PDB	Receptor chain	Peptide sequence	Receptor	Peptide
2v3s	B	GRFQVT	449	4
2vj0	A	PKGWVTFE	782	3
2zjd	A	GGDDDWTHLS	35	9
3bfq	G	ADSTITIRGYVRDNR	117	5
3bu3	A	YNPYPEDYGDIEIG	1181	11
3bwa	A	FPTKDVAL	66	1
3cvp	A	NRASKL	557	4
3d1e	A	GQLGLF	364	1
3d9t	B	ATPFQE	307	4

Single contacts were randomly selected from native contacts (defined using 5 Å distance cut-off based on positions of heavy atoms)

ISSN: 1475-925X