Fig. 1From: Modeling EphB4-EphrinB2 protein–protein interaction using flexible docking of a short linear motifThe protein–protein complex structure prediction pipeline. The figure shows three consecutive steps of our method: (1) CABS-dock based docking of the SLiM sequence to the protein (this step requires input protein structure and the SLiM sequence), (2) reconstruction of the complex based on CABS-dock prediction, and (3) final refinement of the complexBack to article page