Table 9 General shortlist of mG (top list), GB (middle list) and Ph (bottom list) sequences from the subset generated using Sezerman transformation that were consistently misclassified to a different specific sub-family
From: Using random forests for assistance in the curation of G-protein coupled receptor databases
Name | mG | ||||||
|---|---|---|---|---|---|---|---|
mG | CS | GB | VN | Ph | Od | Ta | |
a8dz71_danre | 0.016 | 0.011 | 0.000 | 0.216 | 0.465 | 0.270 | 0.022 |
a8dz72_danre | 0.103 | 0.034 | 0.011 | 0.069 | 0.497 | 0.194 | 0.091 |
q5i5d4_9tele | 0.034 | 0.028 | 0.000 | 0.101 | 0.235 | 0.598 | 0.006 |
q5i5c3_9tele | 0.033 | 0.022 | 0.011 | 0.116 | 0.254 | 0.547 | 0.017 |
XP_002163014 | 0.119 | 0.017 | 0.028 | 0.435 | 0.294 | 0.079 | 0.028 |
Name | GB | ||||||
|---|---|---|---|---|---|---|---|
mG | CS | GB | VN | Ph | Od | Ta | |
b3rj55_triad | 0.466 | 0.052 | 0.110 | 0.084 | 0.194 | 0.010 | 0.084 |
XP_002738008 | 0.574 | 0.024 | 0.136 | 0.077 | 0.118 | 0.012 | 0.059 |
Name | Ph | ||||||
|---|---|---|---|---|---|---|---|
mG | CS | GB | VN | Ph | Od | Ta | |
a7sdg9_nemve | 0.615 | 0.046 | 0.126 | 0.057 | 0.126 | 0.006 | 0.023 |
a7s0d2_nemve | 0.591 | 0.069 | 0.103 | 0.039 | 0.128 | 0.034 | 0.034 |
b3s157_triad | 0.706 | 0.011 | 0.068 | 0.056 | 0.079 | 0.000 | 0.079 |
q4spr3_tetng | 0.280 | 0.065 | 0.480 | 0.010 | 0.120 | 0.005 | 0.040 |
NP_001093020 | 0.022 | 0.005 | 0.102 | 0.699 | 0.140 | 0.027 | 0.005 |
b0uyj3_danre | 0.870 | 0.005 | 0.041 | 0.010 | 0.073 | 0.000 | 0.000 |
XP_001075542 | 0.030 | 0.015 | 0.005 | 0.197 | 0.099 | 0.611 | 0.044 |
XP_001521075 | 0.430 | 0.006 | 0.436 | 0.017 | 0.087 | 0.000 | 0.023 |