Table 12 Refined shortlist of mG (top list), GB (middle list) and Ph (bottom list) sequences from the subset generated using the three transformations that were consistently misclassified to a different specific sub-family in all three transformations
From: Using random forests for assistance in the curation of G-protein coupled receptor databases
Name | mG | ||||||
|---|---|---|---|---|---|---|---|
mG | CS | GB | VN | Ph | Od | Ta | |
a8dz71_danre | 0.045 | 0.035 | 0.000 | 0.205 | 0.370 | 0.330 | 0.015 |
a8dz72_danre | 0.028 | 0.045 | 0.006 | 0.198 | 0.435 | 0.209 | 0.079 |
q5i5c3_9tele | 0.032 | 0.005 | 0.000 | 0.074 | 0.159 | 0.725 | 0.005 |
Name | GB | ||||||
|---|---|---|---|---|---|---|---|
mG | CS | GB | VN | Ph | Od | Ta | |
XP_002738008 | 0.784 | 0.011 | 0.086 | 0.011 | 0.086 | 0 | 0.022 |
Name | Ph | ||||||
|---|---|---|---|---|---|---|---|
mG | CS | GB | VN | Ph | Od | Ta | |
a7sdg9_nemve | 0.836 | 0.011 | 0.063 | 0.005 | 0.058 | 0.011 | 0.016 |
b3s157_triad | 0.670 | 0.017 | 0.067 | 0.095 | 0.095 | 0.034 | 0.022 |
XP_001075542 | 0.000 | 0.006 | 0.000 | 0.161 | 0.122 | 0.706 | 0.006 |
XP_001521075 | 0.549 | 0.006 | 0.429 | 0.000 | 0.017 | 0.000 | 0.000 |