Table 11 Refined shortlist of mG (top list), GB (middle list) and Ph (bottom list) sequences from the subset generated using the three transformations that were consistently misclassified to a different specific sub-family in two out of the three transformations
From: Using random forests for assistance in the curation of G-protein coupled receptor databases
Name | mG | ||||||
|---|---|---|---|---|---|---|---|
mG | CS | GB | VN | Ph | Od | Ta | |
q5i5d4_9tele | 0.055 | 0.011 | 0.022 | 0.088 | 0.203 | 0.599 | 0.022 |
Name | GB | ||||||
|---|---|---|---|---|---|---|---|
mG | CS | GB | VN | Ph | Od | Ta | |
b3rj55_triad | 0.559 | 0.028 | 0.107 | 0.085 | 0.153 | 0.006 | 0.062 |
Name | Ph | ||||||
|---|---|---|---|---|---|---|---|
mG | CS | GB | VN | Ph | Od | Ta | |
b3s157_triad | 0.670 | 0.017 | 0.067 | 0.095 | 0.095 | 0.034 | 0.022 |
q9pwe1_ictpu | 0.825 | 0.005 | 0.057 | 0.010 | 0.103 | 0.000 | 0.000 |
b0uyj3_danre | 0.877 | 0.000 | 0.005 | 0.000 | 0.118 | 0.000 | 0.000 |