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Table 10 General shortlist of mG (top list), GB (middle list) and Ph (bottom list) sequences from the subset generated using Davies transformation that were consistently misclassified to a different specific sub-family

From: Using random forests for assistance in the curation of G-protein coupled receptor databases

Name

mG

mG

CS

GB

VN

Ph

Od

Ta

a8dz71_danre

0.022

0.043

0.016

0.239

0.342

0.299

0.038

a8dz72_danre

0.006

0.017

0.000

0.115

0.293

0.557

0.011

q5i5c3_9tele

0.124

0.006

0.006

0.102

0.085

0.667

0.011

a7s0d3_nemve

0.108

0.072

0.006

0.174

0.419

0.186

0.036

b3s5y8_triad

0.059

0.000

0.909

0.016

0.005

0.000

0.011

XP_002187232

0.117

0.000

0.766

0.006

0.070

0.006

0.035

Name

GB

mG

CS

GB

VN

Ph

Od

Ta

a7s6r9_nemve

0.683

0.032

0.063

0.069

0.111

0.005

0.037

b3rj55_triad

0.559

0.028

0.107

0.085

0.153

0.006

0.062

XP_002738008

0.560

0.010

0.015

0.210

0.120

0.055

0.030

a8q0q5_bruma

0.566

0.032

0.111

0.127

0.116

0.011

0.037

Name

Ph

mG

CS

GB

VN

Ph

Od

Ta

a7sdg9_nemve

0.564

0.069

0.112

0.106

0.117

0.005

0.027

a7s1x6_nemve

0.697

0.022

0.059

0.059

0.119

0.005

0.038

a7s0d2_nemve

0.556

0.012

0.175

0.058

0.135

0.053

0.012

b3s157_triad

0.674

0.032

0.128

0.021

0.080

0.000

0.064

XP_002940870

0.269

0.183

0.059

0.274

0.118

0.016

0.081

XP_002941708

0.589

0.044

0.039

0.100

0.139

0.000

0.089

NP_001093018

0.000

0.000

0.000

0.906

0.094

0.000

0.000

NP_001093016

0.010

0.000

0.000

0.907

0.074

0.005

0.005

NP_001093017

0.006

0.039

0.011

0.782

0.134

0.006

0.022

XP_002936172

0.000

0.000

0.000

0.895

0.074

0.032

0.000

XP_684341

0.517

0.095

0.060

0.109

0.090

0.015

0.114

q9pwe1_ictpu

0.923

0.000

0.000

0.012

0.053

0.000

0.012

XP_001075542

0.027

0.000

0.000

0.212

0.125

0.625

0.011

XP_001521075

0.305

0.021

0.574

0.005

0.068

0.016

0.011

  1. Values in italics are the highest for the specified sequence