Fig. 5

Example of the protocol processing chain visualization. Protocol biocompatibility—TiGr2—contract is the protocol with the definition of the work (tested material, types of test), protocol biocompatibility—microscopy describes the two different time-lapse microscopy experiments where image time series were recorded, protocols biocompatibility—segmentation describes the process of automatic cell colony detection in the time series and biocompatibility—implantl contains the analysis of the sample coverage by cell and decision about the biocompatibility level of the tested material.