Table 2 Abbreviations of the methods used throughout this paper. Table reproduced from [13], with permission from Springer
From: Approximate parameter inference in systems biology using gradient matching: a comparative evaluation
Abbreviation | Method | Reference |
|---|---|---|
C&S | Tempered mismatch parameter using splines-based smooth functional tempering | Campbell and Steele [5] |
INF | Inference of the gradient mismatch parameter using GPs | Dondelinger et al. [4] |
LB2 | Tempered mismatch parameter using GPs in log base 2 increments | Our method |
LB10 | Tempered mismatch parameter using GPs in log base 10 increments | Our method |
GON | Reproducing kernel Hilbert space and penalised likelihood. The penalty parameter is estimated using AIC | González et al. [14] |
GON Cross | Reproducing kernel Hilbert space and penalised likelihood. The penalty parameter is estimated using 3-fold cross validation | González et al. [14] |
RAM | Hierarchical 3 level regularisation approach using splines based interpolation | Ramsay et al. [3] |